Publications 2014

Maya Petersen, Constantin T Yiannoutsos, Amy Justice, Matthias Egger (2014) Observational research on NCDs in HIV-positive populations: conceptual and methodological considerations., Journal of acquired immune deficiency syndromes (1999) 67 Suppl 1, p. S8-16, url, doi:10.1097/QAI.0000000000000253

M Ballif, V Nhandu, R Wood, J C Dusingize, E J Carter, C P Cortes, C C McGowan, L Diero, C Graber, L Renner, D Hawerlander, S Kiertiburanakul, Q T Du, T R Sterling, M Egger, L Fenner, International epidemiological Databases to Evaluate AIDS (IeDEA) (2014) Detection and management of drug-resistant tuberculosis in HIV-infected patients in lower-income countries., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 18(11), p. 1327-36, url, doi:10.5588/ijtld.14.0106

Matthias IeDEA and ART Cohort Collaborations, Dorita Avila, Keri N Althoff, Catrina Mugglin, Kara Wools-Kaloustian, Manuel Koller, François Dabis, Denis Nash, Thomas Gsponer, Somnuek Sungkanuparph, Catherine McGowan, Margaret May, David Cooper, Cleophas Chimbetete, Marcelo Wolff, Ann Collier, Hamish McManus, Mary-Ann Davies, Dominique Costagliola, Brenda Crabtree-Ramirez, Romanee Chaiwarith, Angela Cescon, Morna Cornell, Lameck Diero, Praphan Phanuphak, Adrien Sawadogo, Jochen Ehmer, Serge P Eholie, Patrick C K Li, Matthew P Fox, Neel R Gandhi, Elsa González, Christopher K C Lee, Christopher J Hoffmann, Andrew Kambugu, Olivia Keiser, Rossana Ditangco, Hans Prozesky, Fiona Lampe, Nagalingeswaran Kumarasamy, Mari Kitahata, Emmanuel Lugina, Rita Lyamuya, Saphonn Vonthanak, Valeria Fink, Antonella d'Arminio Monforte, Paula Mendes Luz, Yi-Ming A Chen, Albert Minga, Jordi Casabona, Albert Mwango, Jun Y Choi, Marie-Louise Newell, Elizabeth A Bukusi, Kapella Ngonyani, Tuti P Merati, Juliana Otieno, Mwebesa B Bosco, Sam Phiri, Oon T Ng, Kathryn Anastos, Jürgen Rockstroh, Ignacio Santos, Shinichi Oka, Geoffrey Somi, Christoph Stephan, Ramon Teira, Deo Wabwire, Gilles Wandeler, Andrew Boulle, Peter Reiss, Robin Wood, Benjamin H Chi, Carolyn Williams, Jonathan A Sterne, Matthias Egger (2014) Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries., Journal of acquired immune deficiency syndromes (1999) 65(1), p. e8-16, url, doi:10.1097/QAI.0b013e3182a39979

Luisa Salazar-Vizcaya, Olivia Keiser, Karl Technau, Mary-Ann Davies, Andreas D Haas, Nello Blaser, Vivian Cox, Brian Eley, Helena Rabie, Harry Moultrie, Janet Giddy, Robin Wood, Matthias Egger, Janne Estill (2014) Viral load versus CD4⁺ monitoring and 5-year outcomes of antiretroviral therapy in HIV-positive children in Southern Africa: a cohort-based modelling study., AIDS (London, England) 28(16), p. 2451-60, pubmed

Maya Petersen, Joshua Schwab, Susan Gruber, Nello Blaser, Michael Schomaker, Mark van der Laan (2014) Targeted Maximum Likelihood Estimation for Dynamic and Static Longitudinal Marginal Structural Working Models., Journal of causal inference 2(2), p. 147-185, pubmed, doi:10.1515/jci-2013-0007

Lloyd Mulenga, Patrick Musonda, Albert Mwango, Michael J Vinikoor, Mary-Ann Davies, Aggrey Mweemba, Alexandra Calmy, Jeffrey S Stringer, Olivia Keiser, Benjamin H Chi, Gilles Wandeler, IeDEA-Southern Africa (2014) Effect of baseline renal function on tenofovir-containing antiretroviral therapy outcomes in Zambia., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 58(10), p. 1473-80, url, doi:10.1093/cid/ciu117

Jason R Andrews, Carl Morrow, Rochelle P Walensky, Robin Wood (2014) Integrating social contact and environmental data in evaluating tuberculosis transmission in a South African township., The Journal of infectious diseases 210(4), p. 597-603, url, doi:10.1093/infdis/jiu138

Leigh F Johnson, Janne Estill, Olivia Keiser, Morna Cornell, Haroon Moolla, Michael Schomaker, Anna Grimsrud, Mary-Ann Davies, Andrew Boulle (2014) Do increasing rates of loss to follow-up in antiretroviral treatment programs imply deteriorating patient retention?, American journal of epidemiology 180(12), p. 1208-12, url, doi:10.1093/aje/kwu295

M Schomaker, T Gsponer, J Estill, M Fox, A Boulle (2014) Non-ignorable loss to follow-up: correcting mortality estimates based on additional outcome ascertainment., Statistics in medicine 33(1), p. 129-42, url, doi:10.1002/sim.5912

Gilles Wandeler, Florian Gerber, Julia Rohr, Benjamin H Chi, Catherine Orrell, Cleophas Chimbetete, Hans Prozesky, Andrew Boulle, Christopher J Hoffmann, Thomas Gsponer, Matthew P Fox, Marcel Zwahlen, Matthias Egger, IeDEA Southern Africa (2014) Tenofovir or zidovudine in second-line antiretroviral therapy after stavudine failure in southern Africa., Antiviral therapy 19(5), p. 521-5, url, doi:10.3851/IMP2710

Janne Estill, Hannock Tweya, Matthias Egger, Gilles Wandeler, Caryl Feldacker, Leigh F Johnson, Nello Blaser, Luisa Salazar Vizcaya, Sam Phiri, Olivia Keiser (2014) Tracing of patients lost to follow-up and HIV transmission: mathematical modeling study based on 2 large ART programs in Malawi., Journal of acquired immune deficiency syndromes (1999) 65(5), p. e179-86, url, doi:10.1097/QAI.0000000000000075

Mary-Ann Davies, Margaret May, Carolyn Bolton-Moore, Cleophas Chimbetete, Brian Eley, Daniela Garone, Janet Giddy, Harry Moultrie, James Ndirangu, Sam Phiri, Helena Rabie, Karl-Günter Technau, Robin Wood, Andrew Boulle, Matthias Egger, Olivia Keiser, IeDEA Southern Africa Collaboration (2014) Prognosis of children with HIV-1 infection starting antiretroviral therapy in Southern Africa: a collaborative analysis of treatment programs., The Pediatric infectious disease journal 33(6), p. 608-16, url, doi:10.1097/INF.0000000000000214

Karl-Günter Technau, Michael Schomaker, Louise Kuhn, Harry Moultrie, Ashraf Coovadia, Brian Eley, Helena Rabie, Robin Wood, Vivian Cox, Luisa Salazar Vizcaya, Evans Muchiri, Mary-Ann Davies, IeDEA Southern Africa Paediatric Collaboration (2014) Virologic response in children treated with abacavir-compared with stavudine-based antiretroviral treatment: a South African multi-cohort analysis., The Pediatric infectious disease journal 33(6), p. 617-22, url, doi:10.1097/INF.0000000000000222

Eliane Rohner, Natascha Wyss, Sven Trelle, Sam M Mbulaiteye, Matthias Egger, Urban Novak, Marcel Zwahlen, Julia Bohlius (2014) HHV-8 seroprevalence: a global view., Systematic reviews 3(1), p. 11, url, doi:10.1186/2046-4053-3-11

Lyson Tenthani, Andreas D Haas, Hannock Tweya, Andreas Jahn, Joep J van Oosterhout, Frank Chimbwandira, Zengani Chirwa, Wingston Ng'ambi, Alan Bakali, Sam Phiri, Landon Myer, Fabio Valeri, Marcel Zwahlen, Gilles Wandeler, Olivia Keiser, Ministry of Health in Malawi and IeDEA Southern Africa (2014) Retention in care under universal antiretroviral therapy for HIV-infected pregnant and breastfeeding women ('Option B+') in Malawi., AIDS (London, England) 28(4), p. 589-98, url, doi:10.1097/QAD.0000000000000143

Nello Blaser, Celina Wettstein, Janne Estill, Luisa Salazar Vizcaya, Gilles Wandeler, Matthias Egger, Olivia Keiser (2014) Impact of viral load and the duration of primary infection on HIV transmission: systematic review and meta-analysis., AIDS (London, England) 28(7), p. 1021-9, url, doi:10.1097/QAD.0000000000000135

Julia Bohlius, Fabio Valeri, Mhairi Maskew, Hans Prozesky, Daniela Garone, Mazvita Sengayi, Matthew P Fox, Mary-Ann Davies, Matthias Egger (2014) Kaposi's Sarcoma in HIV-infected patients in South Africa: Multicohort study in the antiretroviral therapy era., International journal of cancer 135(11), p. 2644-52, url, doi:10.1002/ijc.28894

Eugene T Richardson, Carl D Morrow, Darryl B Kalil, Samuel Ginsberg, Linda-Gail Bekker, Robin Wood (2014) Shared air: a renewed focus on ventilation for the prevention of tuberculosis transmission., PloS one 9(5), Steven J. Drews (ed.), p. e96334, url, doi:10.1371/journal.pone.0096334

Mary-Ann Davies, Emma Kalk (2014) Provider-initiated HIV testing and counselling for children., PLoS medicine 11(5), p. e1001650, url, doi:10.1371/journal.pmed.1001650

Morna Cornell, Richard Lessells, Matthew P Fox, Daniela B Garone, Janet Giddy, Lukas Fenner, Landon Myer, Andrew Boulle, IeDEA-Southern Africa Collaboration (2014) Mortality among adults transferred and lost to follow-up from antiretroviral therapy programmes in South Africa: a multicenter cohort study., Journal of acquired immune deficiency syndromes (1999) 67(2), p. e67-75, url, doi:10.1097/QAI.0000000000000269

Nyanyiwe M Mbeye, Feiko O ter Kuile, Mary-Ann Davies, Kamija S Phiri, Matthias Egger, Gilles Wandeler, IeDEA-Southern Africa (2014) Cotrimoxazole prophylactic treatment prevents malaria in children in sub-Saharan Africa: systematic review and meta-analysis., Tropical medicine & international health : TM & IH 19(9), p. 1057-67, url, doi:10.1111/tmi.12352

Andrew Boulle, Michael Schomaker, Margaret T May, Robert S Hogg, Bryan E Shepherd, Susana Monge, Olivia Keiser, Fiona C Lampe, Janet Giddy, James Ndirangu, Daniela Garone, Matthew Fox, Suzanne M Ingle, Peter Reiss, Francois Dabis, Dominique Costagliola, Antonella Castagna, Kathrin Ehren, Colin Campbell, M John Gill, Michael Saag, Amy C Justice, Jodie Guest, Heidi M Crane, Matthias Egger, Jonathan A C Sterne (2014) Mortality in patients with HIV-1 infection starting antiretroviral therapy in South Africa, Europe, or North America: a collaborative analysis of prospective studies., PLoS medicine 11(9), Agnes Binagwaho (ed.), p. e1001718, url, doi:10.1371/journal.pmed.1001718

Maya L Petersen (2014) Commentary: Applying a causal road map in settings with time-dependent confounding., Epidemiology (Cambridge, Mass.) 25(6), p. 898-901, url, doi:10.1097/EDE.0000000000000178

Eliane Rohner, Fabio Valeri, Mhairi Maskew, Hans Prozesky, Helena Rabie, Daniela Garone, Diana Dickinson, Cleophas Chimbetete, Priscilla Lumano-Mulenga, Izukanji Sikazwe, Natascha Wyss, Kerri M Clough-Gorr, Matthias Egger, Benjamin H Chi, Julia Bohlius (2014) Incidence rate of Kaposi sarcoma in HIV-infected patients on antiretroviral therapy in Southern Africa: a prospective multicohort study., Journal of acquired immune deficiency syndromes (1999) 67(5), p. 547-54, url, doi:10.1097/QAI.0000000000000360

Stephany N Duda, Amanda M Farr, Mary Lou Lindegren, Meridith Blevins, C William Wester, Kara Wools-Kaloustian, Didier K Ekouevi, Matthias Egger, Jennifer Hemingway-Foday, David A Cooper, Richard D Moore, Catherine C McGowan, Denis Nash (2014) Characteristics and comprehensiveness of adult HIV care and treatment programmes in Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration, Journal of the International AIDS Society 17(1), url, doi:10.7448/IAS.17.1.19045