Publications 2017

Cristin Q Fritz, Meridith Blevins, Mary Lou Lindegren, Kara Wools-Kaloutsian, Beverly S Musick, Morna Cornell, Kelly Goodwin, Dianne Addison, Jean Claude Dusingize, Eugène Messou, Armel Poda, Stephany N Duda, Catherine C McGowan, Matthew G Law, Richard D Moore, Aimee Freeman, Denis Nash, C William Wester (2017) Comprehensiveness of HIV care provided at global HIV treatment sites in the IeDEA consortium: 2009 and 2014., Journal of the International AIDS Society 20(1), p. 1-14, url, doi:10.7448/IAS.20.1.20933

Aggrey Semeere, Esther Freeman, Megan Wenger, David Glidden, Mwebesa Bwana, Micheal Kanyesigye, Fredrick Chite Asirwa, Elyne Rotich, Naftali Busakhala, Emmanuel Oga, Elima Jedy-Agba, Vivian Kwaghe, Kenneth Iregbu, Clement Adebamowo, Antoine Jaquet, Francois Dabis, Sam Phiri, Julia Bohlius, Matthias Egger, Constantin T Yiannoutsos, Kara Wools-Kaloustian, Jeffrey Martin (2017) Updating vital status by tracking in the community among patients with epidemic Kaposi sarcoma who are lost to follow-up in sub-Saharan Africa., BMC cancer 17(1), p. 611, pubmed, doi:10.1186/s12885-017-3549-1

Eliane Rohner, Margaret Kasaro, Susan Citonje Msadabwe-Chikuni, Kathryn Stinson, Zainab Mohamed, Hannock Tweya, Matthias Egger, Julia Bohlius (2017) Treatment and outcome of AIDS-related Kaposi sarcoma in South Africa, Malawi and Zambia: an international comparison., The Pan African medical journal 28, p. 261, url, doi:10.11604/pamj.2017.28.261.11300

Steven A Brown, Salma Abbas, Mary-Ann Davies, Torsak Bunupuradah, Annette H Sohn, Karl-Günter Technau, Lorna Renner, Valériane Leroy, Andrew Edmonds, Marcel Yotebieng, Catherine C McGowan, Stephany N Duda, Lynne Mofenson, Beverly Musick, Kara Wools-Kaloustian (2017) Brief Report: Pediatric Cancer Burden and Treatment Resources Within the Pediatric IeDEA Consortium, Journal of acquired immune deficiency syndromes (1999) 76(1), url, doi:10.1097/QAI.0000000000001453

Kathrin Zürcher, Anne Mooser, Nanina Anderegg, Olga Tymejczyk, Margaret J Couvillon, Denis Nash, Matthias Egger, IeDEA and MESH consortia (2017) Outcomes of HIV-positive patients lost to follow-up in African treatment programmes., Tropical medicine & international health : TM & IH 22(4), p. 375-387, url, doi:10.1111/tmi.12843

AIDS-defining Cancer Project Working Group for IeDEA and COHERE in EuroCoord, AIDS-defining Cancer Project Working Group for IeDEA and COHERE in EuroCoord (2017) Comparison of Kaposi Sarcoma Risk in Human Immunodeficiency Virus-Positive Adults Across 5 Continents: A Multiregional Multicohort Study., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 65(8), p. 1316-1326, url, doi:10.1093/cid/cix480

Alana T Brennan, Mary-Ann Davies, Jacob Bor, Gilles Wandeler, Kathryn Stinson, Robin Wood, Hans Prozesky, Frank Tanser, Geoffrey Fatti, Andrew Boulle, Izukanji Sikazwe, Kara Wool-Kaloustian, Constantin Yuannoutsos, Valériane Leroy, Nathalie de Rekeneire, Matthew P Fox (2017) Has the phasing out of stavudine in accordance with changes in WHO guidelines led to a decrease in single-drug substitutions in first-line antiretroviral therapy for HIV in sub-Saharan Africa?, AIDS (London, England) 31(1), p. 147-157, pubmed, doi:10.1097/QAD.0000000000001307

James G Carlucci, Meridith Blevins Peratikos, Aaron M Kipp, Mary L Lindegren, Quy T Du, Lorna Renner, Gary Reubenson, John Ssali, Marcel Yotebieng, Anna M Mandalakas, Mary-Ann Davies, Marie Ballif, Lukas Fenner, April C Pettit, International Epidemiology Databases to Evaluate AIDS (IeDEA) Network (2017) Tuberculosis Treatment Outcomes Among HIV/TB-Coinfected Children in the International Epidemiology Databases to Evaluate AIDS (IeDEA) Network., Journal of acquired immune deficiency syndromes (1999) 75(2), p. 156-163, url, doi:10.1097/QAI.0000000000001335

IeDEA Pediatric Working Group (2017) Taking a critical look at the UNAIDS global estimates on paediatric and adolescent HIV survival and death., Journal of the International AIDS Society 20(1), p. 21952, url, doi:10.7448/IAS.20.1.21952

Morna Cornell, Leigh F Johnson, Robin Wood, Frank Tanser, Matthew P Fox, Hans Prozesky, Michael Schomaker, Matthias Egger, Mary-Ann Davies, Andrew Boulle, International Epidemiology Databases to Evaluate AIDS-Southern Africa collaboration (2017) Twelve-year mortality in adults initiating antiretroviral therapy in South Africa., Journal of the International AIDS Society 20(1), p. 21902, url, doi:10.7448/IAS.20.1.21902

Michael Schomaker, Valeriane Leroy, Tom Wolfs, Karl-Günter Technau, Lorna Renner, Ali Judd, Shobna Sawry, Madeleine Amorissani-Folquet, Antoni Noguera-Julian, Frank Tanser, François Eboua, Maria Luisa Navarro, Cleophas Chimbetete, Clarisse Amani-Bosse, Josiane Warszawski, Sam Phiri, Sylvie N'Gbeche, Vivian Cox, Fla Koueta, Janet Giddy, Haby Sygnaté-Sy, Dorthe Raben, Geneviève Chêne, Mary-Ann Davies, IeDEA West and Southern Africa regional collaborations and COHERE in EuroCoord (2017) Optimal timing of antiretroviral treatment initiation in HIV-positive children and adolescents: a multiregional analysis from Southern Africa, West Africa and Europe., International journal of epidemiology 46(2), p. 453-465, url, doi:10.1093/ije/dyw097

Michael J Vinikoor, Edford Sinkala, Roma Chilengi, Lloyd B Mulenga, Benjamin H Chi, Zude Zyambo, Christopher J Hoffmann, Michael S Saag, Mary-Ann Davies, Matthias Egger, Gilles Wandeler, IeDEA- Southern Africa (2017) Impact of Antiretroviral Therapy on Liver Fibrosis Among Human Immunodeficiency Virus-Infected Adults With and Without HBV Coinfection in Zambia., Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 64(10), p. 1343-1349, url, doi:10.1093/cid/cix122

Patrick A Coffie, Matthias Egger, Michael J Vinikoor, Marcel Zannou, Lameck Diero, Akouda Patassi, Mark H Kuniholm, Moussa Seydi, Guillaume Bado, Ponsiano Ocama, Monique I Andersson, Eugène Messou, Albert Minga, Philippa Easterbrook, Kathryn Anastos, François Dabis, Gilles Wandeler, IeDEA collaboration (2017) Trends in hepatitis B virus testing practices and management in HIV clinics across sub-Saharan Africa., BMC infectious diseases 17(Suppl 1), p. 706, url, doi:10.1186/s12879-017-2768-z

Leigh F Johnson, Margaret T May, Rob E Dorrington, Morna Cornell, Andrew Boulle, Matthias Egger, Mary-Ann Davies (2017) Estimating the impact of antiretroviral treatment on adult mortality trends in South Africa: A mathematical modelling study., PLoS medicine 14(12), Amitabh Bipin Suthar (ed.), p. e1002468, url, doi:10.1371/journal.pmed.1002468

Caroline C Chisenga, Kalo Musukuma, Roma Chilengi, Samuel Zürcher, Virginia Munamunungu, Alice Siyunda, David Ojok, Sophie Bauer, Gilles Wandeler, Michael Vinikoor, for International Epidemiological Databases to Evaluate AIDS in Southern Africa (IeDEA-SA) Institutions (2017) Field performance of the Determine HBsAg point-of-care test for diagnosis of hepatitis B virus co-infection among HIV patients in Zambia., Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 98, p. 5-7, url, doi:10.1016/j.jcv.2017.11.005

Eliane Rohner, Mazvita Sengayi, Bridgette Goeieman, Pamela Michelow, Cynthia Firnhaber, Mhairi Maskew, Julia Bohlius (2017) Cervical cancer risk and impact of Pap-based screening in HIV-positive women on antiretroviral therapy in Johannesburg, South Africa., International journal of cancer 141(3), p. 488-496, pubmed, doi:10.1002/ijc.30749

Cleophas Chimbetete, Catrina Mugglin, Tinei Shamu, Bindu Kalesan, Barbara Bertisch, Matthias Egger, Olivia Keiser (2017) New-onset type 2 diabetes mellitus among patients receiving HIV care at Newlands Clinic, Harare, Zimbabwe: retrospective cohort analysis., Tropical medicine & international health : TM & IH 22(7), p. 839-845, pubmed, doi:10.1111/tmi.12896

Nanina Anderegg, Leigh F Johnson, Elizabeth Zaniewski, Keri N Althoff, Eric Balestre, Matthew Law, Denis Nash, Bryan E Shepherd, Constantin T Yiannoutsos, Matthias Egger, IeDEA, MeSH consortia (2017) All-cause mortality in HIV-positive adults starting combination antiretroviral therapy: correcting for loss to follow-up., AIDS (London, England) 31 Suppl 1, p. S31-S40, pubmed, doi:10.1097/QAD.0000000000001321

Lukas Fenner, Andrew Atkinson, Andrew Boulle, Matthew P Fox, Hans Prozesky, Kathrin Zürcher, Marie Ballif, Hansjakob Furrer, Marcel Zwahlen, Mary-Ann Davies, Matthias Egger, International Epidemiology Database to Evaluate AIDS in Southern Africa (IeDEA-SA) (2017) HIV viral load as an independent risk factor for tuberculosis in South Africa: collaborative analysis of cohort studies., Journal of the International AIDS Society 20(1), p. 1-7, pubmed, doi:10.7448/IAS.20.1.21327

Awachana Jiamsakul, Azar Kariminia, Keri N Althoff, Carina Cesar, Claudia P Cortes, Mary-Ann Davies, Viet Chau Do, Brian Eley, John Gill, Nagalingeswaran Kumarasamy, Daisy Maria Machado, Richard Moore, Hans Prozesky, Elizabeth Zaniewski, Matthew Law (2017) HIV viral load suppression in adults and children receiving antiretroviral therapy - results from the IeDEA collaboration., Journal of acquired immune deficiency syndromes (1999), pubmed, doi:10.1097/QAI.0000000000001499

Andreas D Haas, Joep J van Oosterhout, Lyson Tenthani, Andreas Jahn, Marcel Zwahlen, Malango T Msukwa, Mary-Ann Davies, Kali Tal, Nozgechi Phiri, Adrian Spoerri, Frank Chimbwandira, Matthias Egger, Olivia Keiser (2017) HIV transmission and retention in care among HIV-exposed children enrolled in Malawi's prevention of mother-to-child transmission programme., Journal of the International AIDS Society 20(1), p. 1-10, pubmed, doi:10.7448/IAS.20.1.21947

Elvira Singh, Gita Naidu, Mary-Ann Davies, Julia Bohlius (2017) HIV-associated malignancies in children., Current opinion in HIV and AIDS 12(1), p. 77-83, pubmed, doi:10.1097/COH.0000000000000331

Y F van der Heijden, F Karim, G Mufamadi, L Zako, T Chinappa, B E Shepherd, F Maruri, M-Y S Moosa, T R Sterling, A S Pym (2017) Isoniazid-monoresistant tuberculosis is associated with poor treatment outcomes in Durban, South Africa., The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 21(6), p. 670-676, pubmed, doi:10.5588/ijtld.16.0843

Anastasia S Koch, Daniela Brites, David Stucki, Joanna C Evans, Ronnett Seldon, Alexa Heekes, Nicola Mulder, Mark Nicol, Tolu Oni, Valerie Mizrahi, Digby F Warner, Julian Parkhill, Sebastien Gagneux, Darren P Martin, Robert J Wilkinson (2017) The Influence of HIV on the Evolution of Mycobacterium tuberculosis., Molecular biology and evolution 34(7), p. 1654-1668, url, doi:10.1093/molbev/msx107

Abigail L Manson, Keira A Cohen, Thomas Abeel, Christopher A Desjardins, Derek T Armstrong, Clifton E Barry, Jeannette Brand, Jeannette TBResist Global Genome Consortium, Sinéad B Chapman, Sang-Nae Cho, Andrei Gabrielian, James Gomez, Andreea M Jodals, Moses Joloba, Pontus Jureen, Jong Seok Lee, Lesibana Malinga, Mamoudou Maiga, Dale Nordenberg, Ecaterina Noroc, Elena Romancenco, Alex Salazar, Willy Ssengooba, A A Velayati, Kathryn Winglee, Aksana Zalutskaya, Laura E Via, Gail H Cassell, Susan E Dorman, Jerrold Ellner, Parissa Farnia, James E Galagan, Alex Rosenthal, Valeriu Crudu, Daniela Homorodean, Po-Ren Hsueh, Sujatha Narayanan, Alexander S Pym, Alena Skrahina, Soumya Swaminathan, Martie Van der Walt, David Alland, William R Bishai, Ted Cohen, Sven Hoffner, Bruce W Birren, Ashlee M Earl, Alena Skrahina, Soumya Swaminathan, Martie Van der Walt, David Alland, William R Bishai, Ted Cohen, Sven Hoffner, Bruce W Birren, Ashlee M Earl (2017) Genomic analysis of globally diverse Mycobacterium tuberculosis strains provides insights into the emergence and spread of multidrug resistance., Nature genetics 49(3), p. 395-402, url, doi:10.1038/ng.3767

Melony Fortuin-de Smidt, Reneé de Waal, Karen Cohen, Karl-Günter Technau, Kathryn Stinson, Gary Maartens, Andrew Boulle, Ehimario U Igumbor, Mary-Ann Davies (2017) First-line antiretroviral drug discontinuations in children., PloS one 12(2), Abdelwahab Omri (ed.), p. e0169762, url, doi:10.1371/journal.pone.0169762

Mary-Ann Davies, Priscilla Tsondai, Nicki Tiffin, Brian Eley, Helena Rabie, Jonathan Euvrard, Catherine Orrell, Hans Prozesky, Robin Wood, Dolphina Cogill, Andreas D Haas, Annette H Sohn, Andrew Boulle (2017) Where do HIV-infected adolescents go after transfer? - Tracking transition/transfer of HIV-infected adolescents using linkage of cohort data to a health information system platform., Journal of the International AIDS Society 20(Suppl 3), p. 16-24, url, doi:10.7448/IAS.20.4.21668